Publication Metadata Template

A template outlining metadata to use as annotations for Publication ‘file’ entities.

Attribute Description Required Valid Values
project A sub-level attribute of `program` specifying a research initiative working to investigate particular hypotheses. True AIM for RA, ELLIPSS, LOCKIT, RA, SLE, STAMP, V-CoRT
publicationDate The publication date extracted from PubMed database True
DOI Digital object identifier True
program Name of the funding program that supported the generation of data and associated files True AMP AIM, AMP RA/SLE, Community Contribution
Component A high-level attribute for grouping attributes into templates. True
title Title of the publication. True
associatedDataset The synID of a Dataset entity. This serves to link other Synapse entities to Dataset entities. When used to annotate a publication Dataset this attribute should include the synID for an experimental Datasets from which the publication data was derived. Multiple synID can be specified using a comma-delimited list. False
PMID PubMed(R) Identifier True
publicationType General classification of publication. True correction, peer-reviewed, pre-print
journal Journal in which the publication was released True
PMCID Pubmed Central Identifier, formatted as a compact URI string that will automatically resolve into a URL based on the Synapse bioregistry; e.g., pmc:PMCxxxxxxxx False
year Year (YYYY) in which the paper was published. True
programPhase A label noting which AMP RA/SLE program phase generated the data. True I, II