Skip to main content
Link
Menu
Expand
(external link)
Document
Search
Copy
Copied
Home
Metadata Templates
Biospecimen Metadata Template
Bulk ATAC-seq Assay Metadata Template
Bulk RNA-seq Assay Metadata Template
Clinical Metadata Template
CyTOF Assay Metadata Template
Dataset Annotation Template
FCS File Annotation Template
Fastq File Annotation Template
In Vitro Biospecimen Metadata Template
Olink Assay Metadata Template
Olink File Annotation Template
Publication Metadata Template
Spatial Assay Metadata Template
Spatial Imaging File Annotation Template
scRNASeq Assay Metadata Template
scRNASeq Processed Data Annotation Template
scVDJSeq Processed Data Annotation Template
snATAC-seq Assay Metadata Template
snATACSeq Processed Data Annotation Template
snRNASeq Assay Metadata Template
snRNASeq Processed Data Annotation Template
Attributes
10xProbeSetReference
acknowledgmentStatement
age
ageDiagnosis
ageUnits
alignmentReference
altSampleID
anatomicalSite
ARKRelease
assay
associatedCodeURL
associatedDataset
biospecimenID
biospecimenSubtype
biospecimenType
BRENDA
CDASI
cellOntologyID
cellRangerOutput
cellType
codingLanguage
comorbidities
Component
custom10xProbeSetSynID
dataCollectionBatch
dataLevel
datasetDescription
datasetStatus
datasetType
dataSubtype
dataType
dbGapAccession
diabetesType
diagnosis
DOI
DOID
ethnicity
eventCount
FACSPopulation
fileFormat
FMAID
height
heightUnits
ImmPortAccession
individualID
inputCellCount
journal
krennInflammatory
krennLining
krennStroma
krennSynovitisScore
libraryID
libraryPrepMethod
librarySpikeIn
metadataStandards
metadataType
notes
nucleicAcidSource
parentBiospecimenID
PASI
percentCellViability
plateID
platform
PMCID
PMID
primaryCellSource
processedDataType
program
programPhase
project
psoriasisType
publicationDate
publicationSynID
publicationType
race
readLength
resourceType
RObjectClass
salivaCollectionProcedure
sampleProcessingBatch
sequencingSaturation
sequencingSpikeIn
sex
skinSiteStatus
skinSunExposure
slideID
softwareAndVersion
species
specimenModality
synovialCollectionProcedure
targetPanel
targetPanelSize
targetPanelSynID
title
totalReads
treatment
treatmentTimepoint
userDefinedCellType
VASI
VETI
VIDA
visitID
vitiligoPhenotype
vitiligoType
weight
weightUnits
year
ARK Portal
ARK Portal Data Model
Visit the ARK Portal
Attributes
species
species
The genus species of sample or subject origin.
Valid Values
Description
Source
Homo sapiens