alignmentReference
The genomic/transcriptomic reference used for performing read alignment against.
| Valid Values | Description | Source |
|---|---|---|
| 10x Cell Ranger ATAC Human Reference GRCh38 2024-A | ||
| 10x Cell Ranger Human Reference GRCh38 2020-A | ||
| 10x Cell Ranger Human Reference GRCh38 2024-A | ||
| 10x Human Transcriptome Flex Probe Set v1.0.1 | ||
| 10x Human Transcriptome Flex Probe Set v1.1.0 | ||
| 10x Human Transcriptome Flex Probe Set v2.0 | ||
| 10x Human V(D)J reference (GRCh38) | ||
| 10x Visium Human Transcriptome v1 | ||
| 10x Visium Human Transcriptome v2 | ||
| GRCh38 | ||
| custom reference | ||
| modified GRCh38 | ||
| unknown | ||
| vdj_GRCh38_alts_ensembl-4.0.0 |